CDS
| Accession Number | TCMCG015C07935 |
| gbkey | CDS |
| Protein Id | XP_027104957.1 |
| Location | join(8966184..8966888,8968176..8968671,8969709..8969860,8969986..8973336,8973561..8973773,8974060..8974263,8974433..8974636,8975535..8975693,8976229..8976579,8978403..8978762) |
| Gene | LOC113725794 |
| GeneID | 113725794 |
| Organism | Coffea arabica |
Protein
| Length | 2064aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027249156.1 |
| Definition | uncharacterized protein LOC113725794 isoform X3 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Ribosome 60S biogenesis N-terminal |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K07766
[VIEW IN KEGG] ko:K14861 [VIEW IN KEGG] |
| EC |
3.6.1.52
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGTCCTCAGTTGGTGATGGATTTACATGTGCCTATGTTAACTCTCAGTCTCAGGAGCCCCCATCCATTGACAATCTGATAGTCCAAGACATTATAAAGTGCATAGGGCCACGCCCATTCACCCGATTGGTAATGAATAAAGGGTTGCTTCACTCTGATCCTCTTGTGAAACATGTAACTCTGAGGCTTGTATCGGAGAAACTAAAGCTTCTCGACTTTTTAATTGGCTCTTTAAATGATCTGTCCAGTTCCAGTGATCAAGTGATGCATAAGTGGGCATCTTTCAAGCGAGATGTTCAGAATGTAGTCCAGATTTTACTTCCTGATCCCCAGGTGCTATTATCACTACTTTCTTCACTCAGTGGCTACTGCAAGAGTCCTGCATCAAGAATGAAGAGGGCTGCAGATGTAGATGTTACAGTCGAGCATAATTTGCACAAGAGGAAGAAGTTGAAGATGAATAGCGTGGATGAGGACATGGATATTCTCGTCAGTGGGGTTAGTTCAACCACTGAAGGGGCTTTGACTGAGAATGATGGAGTTTCAGAAGAGGATGTTGAGGATCAGCTGAATGGTGGAGTTGACCTCCTGAAGCCTGTTCTAGAAATTTGGGGTTTGCAGGGATGCTCCAGTGTAGATATCAGAACTGAAGATGGGGACACATACTTTTACTCTAAGTTGCTTGATGTTTTCAGAATTTATCATCGGACTCTGCCTACTGCTGTGGAAGGATCATTTGACTTCTTTAAAGTTCTCCCAAGCAATCCTTTAGCACTACCTACAATTTTGCAGCAGTCTATGCTGTCACTGCTTGTAGAACAAGTTGTTGGGTCCAACAAGTCTCAGATTTCCATGAGAACCCAACCATTGATGTACAAGTATCTTCATTCATTTATCAATTTGTTTATGTATTCACCAATAAGAGACATAAAAGATCAGGCTTACTCTTTAGCACAAGCAGCCATGTTGAGTACAGGTGCATTTGACAGAAATCCAAGGGAAATTTCTGCTTGGTTTCTATTTATACCTGGCTATACCAGTGTGGTTATTGATGGTCCAAAGCATGGGATTGAAGTATTCCAAAAGTTGTCTTCAGTTGTCATCTCTTTTCTTTGCGATGCAGTTTCTACTACTGGGAACAACTTGTTCAAATATTTGGATCTCTTAAGGTGCTATATCCGTGATTTAGACGTTTCTACAGATACATTTCCCAATTTTAGCCCTTTCATAGTTTGTGTACTGGAGAAGTGCTTGAGGTTACTTAGCTCTGAAACTGGTTCTTTTACATTGCCCGAGAAGTCAATGATATCATTGTATGTTTCTACCACATTAAAGTATCTCCTGGAAACTCAGGTTGAAGGTGGACTTTTGTGTTCCCTGACGCAGCTTTTGATATCAGAGAGACTTAAAGGTTGTTGCGATATGATTGGATTCTGCCCTTGTGAATGGATGCCGATGAATAGTTTGTTATATTTTGCAAGGAATACCGTGCAGCAACAAATTTATAGCAGTTTTATGTCTGAAGAGAAAGCTACTGGTCTTGGTGGTTCATTTTCTGAGACACTTTCTGAAGTTAATAGGATTTTAAGGACTAAGGATCATTGTGGGTTGCTTGGAGTTACTATGGGGTTTTCTTTTTCAATGATATGCACCACAGCTGATCAGATATTGCAGAATTTCCCATCGACCATCTCTACTTCTACTAAATTGCTTGGGGTTCCTTTCTCAATTTTGTTGTTGAGATTCTTTCTCGAACCAAGTCATTTTGCTGAAGTTTTCAAGTTATGGCCTAAAATATGCTTTGCTGGAGTTGACAAAGTTATAAGTGGAGTTCATGATGGAGAAGGGCAGACAATAGCTAATGAGCTTGATGATTCACCAGATTCTGCTTCTATTGCATTCTCTTTTTTAGTAAAGAATGCTCCTTTTCATGTGCTCTTTCCAGCTATTTTTTTCACTGATGGATTGCATTTGCTTGGTCACTCAAAAGTGCAGAATTTGCTTCTGGATAAATTCACTGAGAGTACACCTGACTTCTCTGTCTCTTCTCTCTGCCGTCTTCTCTTTTGCTTGCTTCAAGCGCGATTGGCCTATAGAATCAAACCATCTGATGAACTTGAAAAACTTTGTGAATCATCTTGTTTTCTTGCAAAGCACATAGTAAAACAATCATTTGTTGAAAAATTTGGTCCTGATTGCTCCCCGCGTGTTTTGCCTCCTTTATCATCTGGTCATATTCGAGAAGTGGCTGAAATAATTCTTGGCCACCCTTTACTCACTGCATTGCTGGAATGGCCTTTGCATACCGATAATGATGTTGGTGACATGATTTTTATGAAACCTCCAGAAACCTTTCTTCAGTATGCTGAACGGGGTGTTCGTAAAATAGATCATCATATTTTGCAGTTGTTAAGAAGAACCACATCTGAGCTTTTGGTTCATGTATTTAGTAAATGTAGATCACCATCTGTGGTTGATCATTCTACTGAACGGATTGCAAAGGCTTTCAAGGCTCTGGTGCAGAAGCTATTTTTGACATTTAAGGCGAGGTTCACAGATTCCAGAAAGACAGATGATTTGATGCCTCTAATTCCTACATTGTATGCTTTGCATAGTCTGAGTGAATTCATATGTCCCTTTGAGTTGCTCAATTTGGTGCACTGGTTGTTCTCCAGAATTGATCTAAATGATACTGCAGTTTCCATTTCTTGTCAAAGATGTGGTTTGTCTGTTGGATTACAAATTGCTTCATGGGCTTTTGATTCTCTTTCTTTATATATGTTAGAGCCACATGCAAAGAGGACATTATTCAATTTCTTTATGGGTACTGGAAACAGAAGTTTTGAAATTACCCTTTTTGAGAGAATTTTTAACAGCATATTTGAGATTGCCACTCACACTCAACTAGAAGTTGCTGATATATGTTTATTCAAAGCTGTTAAGATCATCAAAATGCATAAATGTATGGAGAAGACCAGCTTACCTTTTGTTATGGCTACTTCAAGACTTCTACCCAGTGTTCCTGTGAACTTTATTTCTTATTGCTTGGACAAGACAACCAAGACTAAGTGTGACTTCTTGTTTCTTCTGTCTGAGATGAGCTCCCTGCATCTTTGTGTATTTGGACATTTGGTTTCTGGTAAAATTAGTAATAATCAAGCTCTTAAGGTCAACAAGGAAGAAAACTGCAATCGGCCTCAGTACTCTGAAGAGTTCTTGATGCTTCTGCCAACTGTTCTGTTATACTTGAGGTCAAATTTTCTGAAATTTGGGGGCCAATTTGGCAAGCATGTTGAAAACACTTCTTCTTTCTTTTGGAAGATCCTTTTGCGTGGTTTCTCTAACTGGAAGAGTTTTGTTTCGGAAGAGATATTTGAGATAAAACTTGTTGAGTGCTCATCTTTATGCATGGAAGATTTTTCTAACCTTTTCTCTTCCAGTCTTCTTGGAAAAGCAGTACTGCTGATGCGTCATTACCTTGCTGTGAGTGGACACTTGGTGAAAATGAAAAGGCTATTGAGTACATTTGATTCTGTTTGCCCACATGCGAGTGCACAGAATGATCTTCTGGACTGCGATGCTAGAGAAATTGGTGTTTGTTCTCTTGAGTTGTCTTTGAACTTTGTGAACAAAATTATTGCAAAGATATGCCTCTGTTGGATGTTGTTATTTCCAGAGCATAATAATCTTCAATCTGTAGTGAAAGATGGAAAGAAAAAAGGAATTGAATCAGAAGTTAGCATTTTGAGAATCCGATTTTTAAGTATGCTGGTCCATTCATGGCAACGTCTTGTGGAGAATTTTCATACATGCAGGCAAGGAGAGAACATAAGGTCGTCATTGTTTAGATTCTTGGAGATCTTCATTGCTAAGAATATAGTAGCATTGGTAAGAGAAATGCATGATTGCCTGGTTGAATTGCATTCGCTTCCTTTCTTAGACCAACTTGCCAAATATTCTCTTCTTCATAGGTTTGATGACCCTACCACAATTAGGATGCTTAGAATTGTTCTTATTTCACTATCTGAGGGAAAGTTCTTGTGCATTTCAATTCTCCAGCTGTTACTTGCTCACTCTCAATTTGCTCCAACCATTCTATTTGCCCATTCATCAACTGTTTGTACTCAATTTGGTATGAGTTTTGCTCCGGCACCCAGCATTATGAGGTTATTTACTGTTCTTCATACTGAAGAAAACACGGTTGATGGAAAAAAGGATGCTCATGAAACTGGGCCTCACATGAAGAAGTTGGAACTGATTAAGTTGCTCAGAGTACTAATACATATCTTGGGTCAGCAACATTATCTTGATTCTGAAACATCCAATGGCTTAAATTTGAAGGAATTGGTTTTGGTGCTTTTGTCTTCTTATGGAGCAACCATGGATGAGATTGATTTGGAAATGTATAGCCTCATGAATGAAATTGAGGCTATTGATAAATCAGTCTCTGAAGGTATTGCTGAAATGGATTTTCTATGGGGCTCTGCTTCTCTGAAGGTGAGACAAGAAAGGGAACAAAAGCAAAGTGTATCTTCTTTGAGTAACTCATATGATAATGAAGTAGTTGGAGAGAGACGAAGGATTCAATTTAGAGAAAATCTTCCCATTGACACCAAATTATGTGCAAAGACAGTCCTTTGTTTTCCTCATGATAGATTTGCTGATGGGAGCTTGAGCAAGCTCCAAACAGATGATTCTGATGAGGGCTACAATGCAAATTCTAAGAAGGTGCAACTTTATGATCCAGTTTTCATCTTGCGTTTTTCAATTCACAGTCTTGCAATGGAGTATATTGAGCCCCTGGAGTTTGCTAGTTTGGGTTTGCTTGCAATTACATTTATCAGTTTGTCTTCTCCTGATGCTGATACAAGGAAATTGGGCTATGAGGCTGTTGTGAGATTTAAGAGTGCTGTGGAGAAATGTCGCAAGAGGAAGGATGTGATGCGACTCCGGCTCTTAGTATCATACTTGCAAAATGGTATACAAGAAGAGTGTCAGAGGATTCCTTCCATAACTGCTGTATTCATTGCGGAAGCTTCTTTTGTTCTGTTAGATTCTTCCCATGATCATTATTCAGCTATAAGTAAATGCCTGATGCAGTCATCAGGTGCTAATATGAAGGGTGTACCATTATTCCAAGAATTCTTCTGGAGTAGCTCTGTTACTTTTAAGTCGGAAAGGTTGTGGATGCTTCAGCTTTTAAACACATCTCTGACTATGGATGATGATGCTCAAATACTTGTCAGAAATTCCATTTATGAGATCCTTTTAAATTTTTATGCCTCTCCTCTTTCCGATGACGAGTCAAAGGAACTGATCGTTGAGATGGTGAAAAAGTCCGTCAAAATAAATAAGCTTGCATGGCATTTGGTTGTACGCTGTGGCATAATTTCTTGGCTGTCTTCTCATGTTGCATCTTTTTACGGGATTCTACTCAGGGACCAGAGAAGTTTTTCATTTGCTAAGTTAGCTATGGTTCTGGAGGTAGCCAATGATGTTATTATGTCTAGAAATACTAGTGAGTGGTTGCAAAAATATGCCCTAGAGCAGCTTTCTGAACTTGCAGCTCATCTGTACAGAATCTTAGTTGGTTGTTCTAAACATATACAAGAGAAAACCAGAATCATTGATTTGATTCTAGAACTATTGATGTCAACCCTGAAGATCTCACAGAAAAGAAAAGTATATCAGCCGCATTTTACAATATCTTTTGAAGGTTTATACCATTTGTACGAAGCTGTTGATGTCTGTTGCAGTGGGACCTTCAGTTCTACTGCTGAGATTGGACTGAAAGCTGTCCTTATGAGTACTCCTCCAGTTTCTATACTTCACATGGATAAAAATAAGCTTTTGAAGTTTGTTAGCTGGGCAATATCAACTGCTGTGCAGTCAAACTTGATGGAGGTGCCTGAATCTGAAGCAATGTATAGCAATGCCTTGAGATTTTCAGAACAATCTGAAGAGGATCTTGTATCAAAGCTTTTAAGATGGCTGACTGCCTCAGTGATTCTTGGAAGGCTTTCATGGAAATTGAGTGATTTGAATTCCACTAGTTCTTCTGAAATATTAAAGCTTGATAATCTGCATTGTATCATGGACTATTGTGTGAAGGAATGTGGAGAAAACCAGGAGAATTTTGGCAGCAAAGAGATACTAGCTGTATCAATTTTTACCTACAGCAGCTTGCAGGCATAA |
| Protein: MSSVGDGFTCAYVNSQSQEPPSIDNLIVQDIIKCIGPRPFTRLVMNKGLLHSDPLVKHVTLRLVSEKLKLLDFLIGSLNDLSSSSDQVMHKWASFKRDVQNVVQILLPDPQVLLSLLSSLSGYCKSPASRMKRAADVDVTVEHNLHKRKKLKMNSVDEDMDILVSGVSSTTEGALTENDGVSEEDVEDQLNGGVDLLKPVLEIWGLQGCSSVDIRTEDGDTYFYSKLLDVFRIYHRTLPTAVEGSFDFFKVLPSNPLALPTILQQSMLSLLVEQVVGSNKSQISMRTQPLMYKYLHSFINLFMYSPIRDIKDQAYSLAQAAMLSTGAFDRNPREISAWFLFIPGYTSVVIDGPKHGIEVFQKLSSVVISFLCDAVSTTGNNLFKYLDLLRCYIRDLDVSTDTFPNFSPFIVCVLEKCLRLLSSETGSFTLPEKSMISLYVSTTLKYLLETQVEGGLLCSLTQLLISERLKGCCDMIGFCPCEWMPMNSLLYFARNTVQQQIYSSFMSEEKATGLGGSFSETLSEVNRILRTKDHCGLLGVTMGFSFSMICTTADQILQNFPSTISTSTKLLGVPFSILLLRFFLEPSHFAEVFKLWPKICFAGVDKVISGVHDGEGQTIANELDDSPDSASIAFSFLVKNAPFHVLFPAIFFTDGLHLLGHSKVQNLLLDKFTESTPDFSVSSLCRLLFCLLQARLAYRIKPSDELEKLCESSCFLAKHIVKQSFVEKFGPDCSPRVLPPLSSGHIREVAEIILGHPLLTALLEWPLHTDNDVGDMIFMKPPETFLQYAERGVRKIDHHILQLLRRTTSELLVHVFSKCRSPSVVDHSTERIAKAFKALVQKLFLTFKARFTDSRKTDDLMPLIPTLYALHSLSEFICPFELLNLVHWLFSRIDLNDTAVSISCQRCGLSVGLQIASWAFDSLSLYMLEPHAKRTLFNFFMGTGNRSFEITLFERIFNSIFEIATHTQLEVADICLFKAVKIIKMHKCMEKTSLPFVMATSRLLPSVPVNFISYCLDKTTKTKCDFLFLLSEMSSLHLCVFGHLVSGKISNNQALKVNKEENCNRPQYSEEFLMLLPTVLLYLRSNFLKFGGQFGKHVENTSSFFWKILLRGFSNWKSFVSEEIFEIKLVECSSLCMEDFSNLFSSSLLGKAVLLMRHYLAVSGHLVKMKRLLSTFDSVCPHASAQNDLLDCDAREIGVCSLELSLNFVNKIIAKICLCWMLLFPEHNNLQSVVKDGKKKGIESEVSILRIRFLSMLVHSWQRLVENFHTCRQGENIRSSLFRFLEIFIAKNIVALVREMHDCLVELHSLPFLDQLAKYSLLHRFDDPTTIRMLRIVLISLSEGKFLCISILQLLLAHSQFAPTILFAHSSTVCTQFGMSFAPAPSIMRLFTVLHTEENTVDGKKDAHETGPHMKKLELIKLLRVLIHILGQQHYLDSETSNGLNLKELVLVLLSSYGATMDEIDLEMYSLMNEIEAIDKSVSEGIAEMDFLWGSASLKVRQEREQKQSVSSLSNSYDNEVVGERRRIQFRENLPIDTKLCAKTVLCFPHDRFADGSLSKLQTDDSDEGYNANSKKVQLYDPVFILRFSIHSLAMEYIEPLEFASLGLLAITFISLSSPDADTRKLGYEAVVRFKSAVEKCRKRKDVMRLRLLVSYLQNGIQEECQRIPSITAVFIAEASFVLLDSSHDHYSAISKCLMQSSGANMKGVPLFQEFFWSSSVTFKSERLWMLQLLNTSLTMDDDAQILVRNSIYEILLNFYASPLSDDESKELIVEMVKKSVKINKLAWHLVVRCGIISWLSSHVASFYGILLRDQRSFSFAKLAMVLEVANDVIMSRNTSEWLQKYALEQLSELAAHLYRILVGCSKHIQEKTRIIDLILELLMSTLKISQKRKVYQPHFTISFEGLYHLYEAVDVCCSGTFSSTAEIGLKAVLMSTPPVSILHMDKNKLLKFVSWAISTAVQSNLMEVPESEAMYSNALRFSEQSEEDLVSKLLRWLTASVILGRLSWKLSDLNSTSSSEILKLDNLHCIMDYCVKECGENQENFGSKEILAVSIFTYSSLQA |